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CHM1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CHM1" - Chorismate mutase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHM1Chorismate mutase (347 aa)    
Predicted Functional Partners:
PRD1
Prephenate dehydratase (413 aa)
     
  0.994
SHKH1
Chorismate synthase (422 aa)
   
  0.993
ADC1
Aminodeoxychorismate synthase (724 aa)
   
 
  0.947
EDP02047
Predicted protein (434 aa)
   
 
  0.941
ASB1
Anthranilate synthase beta subunit (229 aa)
   
 
  0.939
SHKD1
Dehydroquinate dehydratase (554 aa)
   
  0.925
ANS1
Anthranilate synthase, alpha subunit (556 aa)
       
  0.923
EDO99801
Predicted protein (147 aa)
   
 
  0.887
DHQS
3-dehydroquinate synthase (476 aa)
       
  0.807
SHKF1
Shikimate kinase (327 aa)
   
   
  0.788
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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