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EDP00130 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00130" - CLIP-associating-protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00130CLIP-associating-protein (1581 aa)    
Predicted Functional Partners:
TOG1
Microtubule associated protein (1942 aa)
     
 
  0.909
EB1
Microtubule plus-end binding protein (280 aa)
     
  0.895
SCC3
Cohesin complex subunit (1259 aa)
     
 
    0.786
EDP04084
Predicted protein (1377 aa)
     
  0.762
TUG
Gamma tubulin; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (468 aa)
     
  0.758
EDO98236
Predicted protein (130 aa)
     
  0.730
EDP07530
Predicted protein (565 aa)
     
  0.726
GCP3
Gamma tubulin interacting protein; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (930 aa)
     
 
  0.721
VPS5A
Subunit of retromer complex (410 aa)
       
 
  0.715
UNI3
Delta tubulin (447 aa)
     
  0.715
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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