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EDP00143 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00143" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00143Predicted protein (446 aa)    
Predicted Functional Partners:
CBF5
Centromere/microtubule binding protein (435 aa)
   
  0.794
EDO98824
Predicted protein (207 aa)
   
  0.763
EDP06043
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1167 aa)
   
   
  0.737
EDP02864
DNA-directed RNA polymerase III, subunit 2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1161 aa)
   
   
  0.724
TRM4
tRNA-(m5C) methyltransferase (392 aa)
     
 
  0.711
FAP42
Flagellar associated protein, adenylate/guanylate kinase-like protein (2457 aa)
   
   
  0.705
RPN1
26S proteasome regulatory subunit (895 aa)
       
      0.669
EDP07957
Predicted protein (1139 aa)
     
        0.662
EDO96263
Predicted protein (494 aa)
     
        0.654
SECY2
Preprotein translocase secY subunit (543 aa)
   
   
  0.636
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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