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EXN1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EXN1" - 3'-5' exonuclease in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXN13’-5’ exonuclease (253 aa)    
Predicted Functional Partners:
DOH1
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor (319 aa)
           
  0.573
CCR4
Not-complex component (735 aa)
           
  0.573
EDP01120
Ubiquitin-like protein (94 aa)
           
  0.538
EDP01119
Predicted protein (97 aa)
           
  0.538
EDO98075
Predicted protein (79 aa)
           
  0.538
ODA13
Flagellar outer dynein arm light chain 6 (120 aa)
       
 
  0.535
MOT24
Dynein light chain, type 1 (103 aa)
       
 
  0.535
FLA14
Outer dynein arm light chain 8 (91 aa)
       
 
  0.535
EDO98322
cysteinyl-tRNA synthetase (637 aa)
           
  0.473
MLH1
Mismatch repair protein (1007 aa)
           
  0.470
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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