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EDP00149 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00149" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00149Predicted protein (459 aa)    
Predicted Functional Partners:
ALA1
Phospholipid-transporting ATPase (1183 aa)
     
        0.669
EDP07211
Predicted protein (173 aa)
     
        0.660
EDP02740
Predicted protein (372 aa)
     
        0.648
YKT6
R-SNARE protein, YKT6-family (202 aa)
     
        0.599
CPL2
Transcription factor-like protein (521 aa)
     
        0.595
EDP05405
Predicted protein (434 aa)
     
        0.549
EDO98470
Predicted protein (117 aa)
     
        0.525
EDO98261
Predicted protein (139 aa)
     
        0.524
EDO98522
Predicted protein (387 aa)
     
        0.522
EDP01816
NAD(P)-dependent steroid dehydrogenase (437 aa)
     
        0.521
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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