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VPS36 protein (Chlamydomonas reinhardtii) - STRING interaction network
"VPS36" - Subunit of ESCRT-II complex in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS36Subunit of ESCRT-II complex (701 aa)    
Predicted Functional Partners:
VPS22
Subunit of ESCRT-II complex (265 aa)
     
  0.991
VPS25
Subunit of ESCRT-II complex (175 aa)
     
  0.991
VPS28
Subunit of the ESCRT-I complex (225 aa)
       
  0.980
VPS20
Subunit of ESCRT-III complex (232 aa)
       
  0.979
VPS23
Subunit of the ESCRT-I complex (454 aa)
     
  0.953
UBQ6
Ubiquitin fusion protein (805 aa)
     
  0.861
UBQ4
Ubiquitin (242 aa)
     
  0.855
UBQ7
Ubiquitin-fusion protein (338 aa)
       
  0.839
UBQ2
Bi-ubiquitin (153 aa)
       
  0.839
UBQ1a
Bi-ubiquitin, major isoform (153 aa)
       
  0.839
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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