STRINGSTRING
EDP00165 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00165" - Hypothetical protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00165Hypothetical protein (426 aa)    
Predicted Functional Partners:
SUFE
Cysteine desulfuration protein (216 aa)
     
 
  0.641
EDO99985
Predicted protein (404 aa)
 
 
  0.507
EDO97026
Aminotransferase-like protein (355 aa)
     
      0.471
SUFS2
Cysteine desulfurase (406 aa)
       
      0.436
EDP02004
Predicted protein (493 aa)
       
      0.436
EDP01442
Predicted protein (451 aa)
       
      0.436
SUFS1
Cysteine desulfurase (430 aa)
       
      0.436
EDO98384
Predicted protein (453 aa)
       
      0.436
UBA1
Ubiquitin-activating enzyme E1 (1061 aa)
   
  0.400
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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