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STRINGSTRING
EDP00173 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00173" - Chromodomain-helicase-DNA-binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00173Chromodomain-helicase-DNA-binding protein (2000 aa)    
Predicted Functional Partners:
EDP09315
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (552 aa)
     
 
  0.981
EDO96685
Global transcription factor (1054 aa)
     
 
  0.932
EDP07191
Uncharacterized protein (856 aa)
     
 
  0.902
EDP00055
Glycine rich protein (1032 aa)
     
 
  0.897
EDP03315
Paf1 complex component (656 aa)
     
 
  0.888
EDP02327
Histone methyltransferase (1105 aa)
     
 
  0.833
EDP03175
Histone methyltransferase (1708 aa)
     
 
  0.816
EDP08347
Histone acetyltransferase (517 aa)
     
 
  0.801
EDP05744
Predicted protein (1002 aa)
     
 
0.780
EDP06235
SWI2/SNF2-like protein (1286 aa)
     
 
0.776
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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