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EDP00183 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00183" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00183Predicted protein (1149 aa)    
Predicted Functional Partners:
AMT1D
Ammonium transporter (499 aa)
     
        0.641
AGK1
Acetylglutamate kinase-like protein (340 aa)
     
        0.516
EDP01497
N-acetyl-gamma-glutamyl-phosphate reductase (383 aa)
     
        0.512
EDP09078
Predicted protein (440 aa)
     
        0.506
EDO99185
Predicted protein (436 aa)
     
        0.503
CMPS1
Carbamoyl phosphate synthase, small subunit (461 aa)
     
        0.502
EDP09182
Predicted protein (594 aa)
     
        0.501
OTC1
Ornithine carbamoyltransferase (364 aa)
     
        0.480
EDP05087
Predicted protein (113 aa)
     
        0.475
EDP01551
Predicted protein (783 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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