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EDP00213 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00213" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00213Predicted protein (338 aa)    
Predicted Functional Partners:
GPIT1
Glycosyl phosphatidyl inositol transamidase subunit (774 aa)
     
  0.997
LRG5
Predicted protein (681 aa)
     
  0.989
EDP06780
Predicted protein (882 aa)
     
  0.951
SQD2
Sulfolipid synthase (402 aa)
     
   
  0.483
SQD3
Sulfolipid synthase (395 aa)
     
   
  0.483
GTR18
Glycosyl transferase (443 aa)
     
   
  0.483
EDP00878
Predicted protein (371 aa)
   
     
  0.473
GTR1
Glycosyl transferase (254 aa)
     
 
  0.453
EDP00382
Predicted protein (198 aa)
     
   
  0.428
PIA1
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase (300 aa)
     
   
  0.427
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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