STRINGSTRING
EDP00221 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00221" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00221Predicted protein (256 aa)    
Predicted Functional Partners:
EDO96940
Predicted protein (433 aa)
     
        0.651
EDP03313
Predicted protein (521 aa)
     
        0.647
EDP05330
Predicted protein (540 aa)
     
        0.522
MLH1
Mismatch repair protein (1007 aa)
     
        0.521
EDO98749
Predicted protein (258 aa)
     
        0.521
EDP07806
Predicted protein (392 aa)
     
        0.516
EDO97486
Predicted protein (411 aa)
     
        0.516
EDO97146
Hypothetical protein (649 aa)
     
        0.516
RFC4
DNA replication factor C complex subunit 4 (332 aa)
     
        0.515
EDP04177
Predicted protein (193 aa)
     
        0.514
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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