STRINGSTRING
EDP00236 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00236" - Ser/thr protein kinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00236Ser/thr protein kinase (217 aa)    
Predicted Functional Partners:
EDO96568
Predicted protein (473 aa)
     
  0.967
EDP05135
SNF2 superfamily protein (1610 aa)
   
  0.871
EDP07873
Predicted protein (271 aa)
     
  0.852
EDP09841
Predicted protein (1700 aa)
     
  0.836
EDP04414
Predicted protein (154 aa)
     
  0.836
EDO98167
Predicted protein (154 aa)
     
  0.836
EDP09387
Predicted protein (597 aa)
   
0.783
PP2C4
Protein phosphatase 2C-like protein (424 aa)
   
  0.773
EDP05233
Predicted protein (1257 aa)
   
  0.763
EDP06051
Predicted protein (571 aa)
     
  0.750
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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