STRINGSTRING
EDP00238 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00238" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00238Predicted protein (603 aa)    
Predicted Functional Partners:
EDP02761
Predicted protein (823 aa)
     
        0.671
EDO98575
Predicted protein (1243 aa)
     
        0.576
VFL1
Variable flagella protein 1 (1216 aa)
     
        0.534
BLD10
Basal body protein (1640 aa)
     
        0.525
EDP03842
Predicted protein (982 aa)
     
        0.525
EDP00542
Predicted protein (721 aa)
     
        0.522
EDO96882
Predicted protein (1826 aa)
     
        0.521
EDO96863
Predicted protein (377 aa)
     
        0.517
EDP07254
Predicted protein (3707 aa)
     
        0.516
EDO96235
Predicted protein (992 aa)
     
        0.516
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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