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EDP00317 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00317" - RAN GTPase activating protein, RANGAP1 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00317RAN GTPase activating protein, RANGAP1 (498 aa)    
Predicted Functional Partners:
EDP02477
RAN binding protein, RANBP1 (133 aa)
     
  0.984
RAN1
Ran-like small GTPase; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (223 aa)
     
  0.966
EDP09237
Predicted protein (192 aa)
     
  0.965
UBC3
E2 ubiquitin-conjugating enzyme (163 aa)
     
  0.965
UBC4
E2 ubiquitin-conjugating-like enzyme (159 aa)
     
  0.965
IPB1
Importin beta (832 aa)
     
  0.945
XPO1
Exportin (1075 aa)
     
  0.944
EDO96335
Predicted protein (540 aa)
     
  0.879
EDO97001
Regulator of chromosome condensation (606 aa)
     
  0.873
STM2
Ubiquitin-like protein (148 aa)
     
  0.859
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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