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STRINGSTRING
EDP00336 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00336" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00336Predicted protein (170 aa)    
Predicted Functional Partners:
LKHA4
Leukotriene A-4 hydrolase (543 aa)
     
   
  0.640
EDP01282
Acyl-CoA dehydrogenase (785 aa)
   
   
  0.552
SSA7
Predicted protein (765 aa)
     
        0.528
EDP07994
Type I polyketide synthase (21004 aa)
   
   
  0.418
DNJ19
DnaJ-like protein (482 aa)
     
      0.417
EDP00682
Transcription initiation factor TFIID, subunit TAF5 (522 aa)
     
        0.408
EDO98779
MRG family protein (207 aa)
     
        0.408
EDP04294
Predicted protein (238 aa)
     
        0.406
ABH1
mRNA cap-binding protein (1134 aa)
     
        0.403
EDP03403
Predicted protein (513 aa)
     
        0.400
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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