STRINGSTRING
CPLD44 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CPLD44" - Thylakoid lumenal protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPLD44Thylakoid lumenal protein (239 aa)    
Predicted Functional Partners:
EDO99487
Predicted thylakoid lumen protein (246 aa)
   
          0.466
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
           
  0.456
NTD5
5’-nucleotidase (417 aa)
       
      0.453
FAP215
Flagellar associated protein (481 aa)
       
      0.453
EDO96757
Predicted protein (471 aa)
       
      0.453
EDO96756
Predicted protein (472 aa)
       
      0.453
CPLD41
Membrane protein (389 aa)
     
 
  0.438
PSBP3
OEE2-like protein of thylakoid lumen (218 aa)
   
        0.425
EDP08171
Photosystem II stability/assembly factor HCF136 (302 aa)
   
   
  0.407
EDP04576
Aldo/keto reductase (416 aa)
     
   
  0.407
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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