STRINGSTRING
EDP00386 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00386" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00386Predicted protein (268 aa)    
Predicted Functional Partners:
EDO99055
Predicted protein (297 aa)
     
 
  0.906
EDO96774
Predicted protein (192 aa)
       
      0.628
PYR5
Uridine 5’-monophosphate synthase (474 aa)
   
   
  0.542
EIF2G
Eukaryotic initiation factor (462 aa)
       
      0.468
EIF2Ab
Eukaryotic initiation factor (353 aa)
       
      0.468
EDP05236
Predicted protein (2523 aa)
       
      0.468
EIF5Bd
Eukaryotic initiation factor (170 aa)
       
      0.468
EIF2Bb
Eukaryotic initiation factor (314 aa)
       
      0.468
EIF2Ba
Eukaryotic initiation factor (285 aa)
       
      0.468
EIF2B
Eukaryotic initiation factor (434 aa)
       
      0.468
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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