STRINGSTRING
EDP00397 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00397" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00397Predicted protein (720 aa)    
Predicted Functional Partners:
EDP06407
Predicted protein (1459 aa)
     
        0.707
EDO99476
Predicted protein (375 aa)
     
        0.707
EDP09242
Predicted protein (755 aa)
     
        0.700
EDP06944
Predicted protein (539 aa)
     
        0.696
EDP08218
Predicted protein (871 aa)
     
        0.692
EDO99073
Predicted protein (450 aa)
     
        0.690
EDP00281
Predicted protein (609 aa)
     
        0.689
EDO97452
Hypothetical protein (136 aa)
     
        0.688
EDP02526
Predicted protein (1958 aa)
     
        0.686
EDP02291
Predicted protein (874 aa)
     
        0.686
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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