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EDP00407 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00407" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00407Predicted protein (92 aa)    
Predicted Functional Partners:
GLH1
Glycoside-hydrolase-like protein (903 aa)
     
  0.996
AGL1
Alpha glucosidase (1059 aa)
     
  0.896
EDO96413
Predicted protein (263 aa)
     
  0.891
CRT2
Calreticulin 2, calcium-binding protein (420 aa)
     
  0.728
SPL3
SF3A3 splicing factor 3a, subunit 3 (508 aa)
 
 
        0.721
EDO98104
Predicted protein (370 aa)
     
    0.654
RB60
Protein disulfide isomerase 1 (532 aa)
     
    0.636
EDP08333
Predicted protein (427 aa)
     
 
  0.552
EDP05916
Predicted protein (659 aa)
     
    0.541
EDO98665
Transcription factor (163 aa)
       
 
  0.500
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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