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EDP00408 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00408" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00408Predicted protein (81 aa)    
Predicted Functional Partners:
GLH1
Glycoside-hydrolase-like protein (903 aa)
     
  0.982
AGL1
Alpha glucosidase (1059 aa)
     
  0.896
EDO96413
Predicted protein (263 aa)
     
  0.847
CRT2
Calreticulin 2, calcium-binding protein (420 aa)
     
  0.728
RB60
Protein disulfide isomerase 1 (532 aa)
     
    0.636
EDO98104
Predicted protein (370 aa)
     
    0.636
EDP08333
Predicted protein (427 aa)
     
 
  0.545
EDO98665
Transcription factor (163 aa)
       
 
  0.500
HSP90B
Heat shock protein 90B (768 aa)
     
      0.498
TRXo
Thioredoxin o (150 aa)
     
    0.467
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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