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EDP00409 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00409" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00409Predicted protein (862 aa)    
Predicted Functional Partners:
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
 
  0.952
CSN5
COP signalosome subunit 5 (326 aa)
       
 
  0.871
EDP04540
Metal-dependent phosphohydrolase (627 aa)
     
 
  0.826
CUL2
Cullin (782 aa)
     
  0.818
EDP00888
Predicted protein (441 aa)
     
 
  0.800
SMG1
Phosphatidylinositol 3-kinase-related protein kinase (4881 aa)
     
 
  0.701
UNG1
Uracil DNA-glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (190 aa)
       
 
  0.692
POL1A
PolI-like DNA polymerase (498 aa)
     
        0.688
EDP03833
Predicted protein (612 aa)
     
        0.686
EDP08751
Predicted protein (461 aa)
     
        0.680
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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