STRINGSTRING
EDP00443 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00443" - Metallophosphoesterase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00443Metallophosphoesterase (256 aa)    
Predicted Functional Partners:
EDP01357
Predicted protein (282 aa)
     
        0.620
EDO96024
Predicted protein (376 aa)
     
        0.523
DNJ5
DnaJ-like protein (432 aa)
     
        0.521
CPL10
Predicted protein (224 aa)
   
          0.516
EDP02845
Predicted protein (242 aa)
     
        0.513
EDP00815
Predicted protein (218 aa)
     
        0.510
RNB2
3’-5’ exoribonuclease II (699 aa)
     
        0.507
EDO95815
Predicted protein (133 aa)
     
        0.507
EDO98865
Predicted protein (440 aa)
     
        0.504
EDO95687
Predicted protein (159 aa)
   
        0.501
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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