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LHCB4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LHCB4" - Chlorophyll a-b binding protein of photosystem II in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHCB4Chlorophyll a-b binding protein of photosystem II (280 aa)    
Predicted Functional Partners:
PSAH
Subunit H of photosystem I (130 aa)
     
 
  0.920
PSBP1
Oxygen-evolving enhancer protein 2 of photosystem II (282 aa)
     
    0.900
PSBW
Photosystem II reaction center W protein (115 aa)
     
  0.879
PSAD
Photosystem I reaction center subunit II, 20 kDa (196 aa)
     
 
  0.878
PSAF
Photosystem I reaction center subunit III (227 aa)
     
 
  0.878
PCY1
Plastocyanin, chloroplast precursor; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (145 aa)
     
   
  0.861
PSAK
Photosystem I reaction center subunit psaK (113 aa)
     
 
  0.855
PSAG
Photosystem I reaction center subunit V (125 aa)
     
 
  0.855
LHCBM6
Chloropyll a-b binding protein of LHCII type I, chloroplast precursor (253 aa)
     
 
0.829
PSBO
Oxygen-evolving enhancer protein 1 of photosystem II (291 aa)
     
 
  0.814
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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