STRINGSTRING
EDP00463 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00463" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00463Predicted protein (567 aa)    
Predicted Functional Partners:
EDO99911
Predicted protein (105 aa)
       
  0.727
UBC10
Ubiquitin-conjugating enzyme (163 aa)
       
  0.724
EDO96521
Predicted protein (154 aa)
       
  0.724
EDP09748
Predicted protein (158 aa)
       
  0.667
EDP08722
Predicted protein (156 aa)
       
  0.667
EDO99861
Predicted protein (153 aa)
       
  0.667
UBC9
Ubiquitin conjugating enzyme (148 aa)
       
  0.667
EDO97335
Predicted protein (155 aa)
       
  0.667
EDP03036
Predicted protein (167 aa)
     
  0.653
EDO98683
Predicted protein (178 aa)
     
  0.648
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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