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RABL2A protein (Chlamydomonas reinhardtii) - STRING interaction network
"RABL2A" - Small rab-related GTPase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABL2ASmall rab-related GTPase (229 aa)    
Predicted Functional Partners:
EDP05127
Smilar to phosphatidylinositol 3-or 4-kinase (1431 aa)
       
  0.970
GDIC1
Rab GDP dissociation inhibitor protein (442 aa)
     
  0.968
FAP156
Small rab-related GTPase; Small GTPase-like component of the intraflagellar transport (IFT) complex B. Forms a subcomplex within the IFT complex B with IFT25. Has very low GTPase activity either because it lacks the conserved catalytic Gln in position 79 or because it requires some GTPase-activating protein (GAP) for GTP turnover (204 aa)
   
 
 
  0.863
ANK28
Predicted protein (501 aa)
       
  0.858
SEC5
Component of the exocyst complex (1502 aa)
       
  0.846
MYO3
Myosin heavy chain (639 aa)
       
  0.840
EDP04260
Predicted protein (93 aa)
       
  0.840
EDP03325
Predicted protein (728 aa)
       
  0.840
EDP00860
Predicted protein (1033 aa)
       
  0.840
MYO1
Myosin heavy chain, class XI (1643 aa)
       
  0.840
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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