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EDP00483 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00483" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00483Predicted protein (295 aa)    
Predicted Functional Partners:
OXA1
Protein in OXA1/oxaA family (214 aa)
     
        0.651
EDP06658
Predicted protein (863 aa)
     
        0.513
EDP05461
Predicted protein (417 aa)
     
        0.512
EDP07767
Predicted protein (498 aa)
     
        0.494
EDP07530
Predicted protein (565 aa)
     
        0.486
EDP07214
Predicted protein (814 aa)
     
        0.479
EDO96781
SWI/SNF chromatin remodeling complex component (962 aa)
     
        0.475
EDP01183
Predicted protein (657 aa)
     
        0.436
EDO97793
Predicted protein (1958 aa)
     
        0.435
EDP00909
Cohesin subunit SCC1b (304 aa)
     
        0.428
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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