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EDP00494 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00494" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00494Predicted protein (73 aa)    
Predicted Functional Partners:
PRP8
Splicing factor, component of the U5 snRNP and of the spliceosome (2346 aa)
     
      0.878
EDP01571
RNA binding protein (133 aa)
     
      0.838
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
      0.833
EDP06814
Predicted protein (84 aa)
     
      0.829
EDP01082
Predicted protein (186 aa)
     
      0.822
EDP02096
Predicted protein (195 aa)
       
      0.822
EDP01657
Predicted protein (242 aa)
 
            0.732
SMP2
Small nuclear ribonucleoprotein polypeptide G (77 aa)
     
        0.726
WWP1
WW domain protein (746 aa)
     
      0.674
EDP06331
Predicted protein (276 aa)
     
      0.498
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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