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EDP00495 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00495" - MDR-like ABC transporter in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00495MDR-like ABC transporter (1244 aa)    
Predicted Functional Partners:
EDP00406
MDR-like ABC transporter (1249 aa)
   
   
 
0.801
UBQ1a
Bi-ubiquitin, major isoform (153 aa)
     
  0.616
PBE1
20S proteasome beta subunit E, type beta 5; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (273 aa)
     
  0.616
RPL40
Ribosomal protein L40 (128 aa)
       
  0.616
NTRC1
NADPH-dependent thioredoxin reductase (517 aa)
       
  0.613
EDP07906
N-ethylmaleimide sensitive fusion protein (719 aa)
   
  0.602
UBQ7
Ubiquitin-fusion protein (338 aa)
       
  0.597
UBQ6
Ubiquitin fusion protein (805 aa)
       
  0.597
UBQ4
Ubiquitin (242 aa)
       
  0.597
UBQ2
Bi-ubiquitin (153 aa)
       
  0.597
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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