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EDP00497 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00497" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00497Predicted protein (100 aa)    
Predicted Functional Partners:
EDO96747
Predicted protein (125 aa)
     
        0.655
EDP01981
Predicted protein (110 aa)
     
        0.538
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
        0.478
EDP05108
Predicted protein (408 aa)
     
        0.475
SPL3
SF3A3 splicing factor 3a, subunit 3 (508 aa)
     
        0.475
EDP06185
Predicted protein (185 aa)
     
        0.424
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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