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EDP00506 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00506" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00506Predicted protein (241 aa)    
Predicted Functional Partners:
EDP05236
Predicted protein (2523 aa)
     
        0.581
EDP00507
tRNA-nucleotidyltransferase, mitochondrial (200 aa)
     
        0.512
DNJ32
DnaJ-like protein (1012 aa)
     
        0.505
EDO97328
Predicted protein (77 aa)
     
        0.495
RNB2
3’-5’ exoribonuclease II (699 aa)
     
        0.476
EDP06926
Predicted protein (796 aa)
     
        0.475
EDP02132
Predicted protein (750 aa)
     
        0.427
EDO97910
Predicted protein (340 aa)
     
        0.424
EDP06304
Predicted protein (446 aa)
     
        0.423
TRZ4
RNase Z-like protein (730 aa)
     
        0.404
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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