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EDP00507 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00507" - tRNA-nucleotidyltransferase, mitochondrial in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00507tRNA-nucleotidyltransferase, mitochondrial (200 aa)    
Predicted Functional Partners:
PNP1
Polyribonucleotide phosphorylase PNPase (599 aa)
     
  0.822
NTRC1
NADPH-dependent thioredoxin reductase (517 aa)
         
  0.724
PGH1
Enolase (477 aa)
       
 
  0.716
RNB2
3’-5’ exoribonuclease II (699 aa)
   
  0.707
EDP06926
Predicted protein (796 aa)
   
   
  0.679
RNB1
3’-5’ exoribonuclease (1061 aa)
   
  0.664
EDP05463
Predicted protein (223 aa)
   
  0.646
EDO98078
Predicted protein; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (478 aa)
         
  0.569
EDP04875
Predicted protein; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (266 aa)
   
 
  0.567
EDP02132
Predicted protein (750 aa)
   
   
  0.558
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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