STRINGSTRING
EDP00542 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00542" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00542Predicted protein (721 aa)    
Predicted Functional Partners:
EDO96824
Predicted protein (1255 aa)
     
        0.655
VPS18
Subunit of the VPS-C complex (1029 aa)
     
   
  0.633
EDP04624
Predicted protein (573 aa)
     
        0.621
EDP07254
Predicted protein (3707 aa)
     
        0.593
EDP04572
Predicted protein (1585 aa)
     
        0.587
EDP06157
Predicted protein (3039 aa)
     
        0.559
EDP00133
Protein with ARF GTPase-activating domain (875 aa)
     
        0.555
VPS11
Subunit of VPS-C complex (1102 aa)
     
   
  0.550
EDP01844
Predicted protein (890 aa)
     
   
  0.537
EDP08847
Predicted protein (1305 aa)
     
        0.537
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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