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EDP00547 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00547" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00547Predicted protein (563 aa)    
Predicted Functional Partners:
EDP02723
Predicted protein (2516 aa)
     
        0.521
EDP03927
Predicted protein (456 aa)
     
        0.515
EDP06074
Histone deacetylase (312 aa)
     
        0.512
EDP03231
Predicted protein (1072 aa)
     
        0.507
TML1
R-SNARE protein, tomsyn-like family (1204 aa)
     
        0.507
EDP07858
Predicted protein (1182 aa)
     
        0.506
EDP07268
Amine oxidase family protein (407 aa)
     
        0.504
EDP07842
Predicted protein (2593 aa)
     
        0.481
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
        0.481
EDP09999
Predicted protein (424 aa)
     
        0.480
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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