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PUF1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PUF1" - Puf protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUF1Puf protein (717 aa)    
Predicted Functional Partners:
EDP02318
Predicted protein (1017 aa)
     
      0.998
NGB1
Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (691 aa)
     
 
  0.998
NGB2
Nucleolar GTP-binding protein (189 aa)
     
 
  0.998
EDP01097
Predicted protein (181 aa)
     
 
  0.997
EDP03165
Predicted protein (330 aa)
     
      0.997
EDP04107
Predicted protein (309 aa)
     
      0.996
EDP08442
Predicted protein (360 aa)
     
      0.996
EDP06485
RNA binding rRNA processing protein (1280 aa)
     
 
  0.996
EDP00683
Predicted protein (516 aa)
     
      0.996
EDP07890
Predicted protein (319 aa)
     
      0.996
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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