STRINGSTRING
HUS1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"HUS1" - DNA damage checkpoint protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HUS1DNA damage checkpoint protein (277 aa)    
Predicted Functional Partners:
RAD9
DNA damage checkpoint protein (358 aa)
     
  0.986
PCN1
PCNA proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
 
  0.957
ATR1
DNA damage-sensing protein kinase (3304 aa)
     
  0.828
RAD17
DNA damage checkpoint protein (1026 aa)
     
  0.785
ATM1
DNA damage signaling kinase, ATM/TEL1-related (950 aa)
       
  0.768
MRE11
MRE11 eukaryotic DNA repair protein (163 aa)
     
  0.760
RFC4
DNA replication factor C complex subunit 4 (332 aa)
     
  0.753
RFC5
DNA replication factor C complex subunit 5 (356 aa)
     
  0.748
RFC2
DNA replication factor C complex subunit 2 (340 aa)
     
  0.748
RECA
Chloroplast RecA recombination protein (415 aa)
     
  0.742
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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