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EDP00599 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00599" - Nucleosome remodeling factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00599Nucleosome remodeling factor (418 aa)    
Predicted Functional Partners:
EDP04331
Histone acetyltransferase, type b catalytic subunit (444 aa)
     
  0.991
MAT3
Retinoblastoma protein (1209 aa)
     
  0.980
EDP02188
Histone deacetylase (419 aa)
     
  0.979
EDO98539
Histone deacetylase (339 aa)
     
  0.979
EDP01149
Histone deacetylase (418 aa)
     
  0.977
EDO96250
Histone deacetylase (273 aa)
     
  0.977
EDP00341
Predicted protein (91 aa)
     
  0.949
EDP01039
Predicted protein (84 aa)
     
  0.947
PCN1
PCNA proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
  0.941
EDO96788
SIN3 component of histone deacetylase complex (542 aa)
       
  0.934
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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