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SLY1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SLY1" - SM/Sec1-family protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLY1SM/Sec1-family protein (640 aa)    
Predicted Functional Partners:
SYP3
Qa-SNARE protein, Sed5/Syntaxin5-family (339 aa)
     
  0.992
SEC22
R-SNARE protein, Sec22-family (219 aa)
     
  0.984
EDP07906
N-ethylmaleimide sensitive fusion protein (719 aa)
     
  0.982
MEMB1
Qb-SNARE protein, Bos1/Membrin family (224 aa)
     
  0.982
BET1
Qc-SNARE protein, Bet1/mBET1 family (110 aa)
     
  0.982
SNAPA1
alpha-SNAP (303 aa)
     
  0.980
EDP08459
Predicted protein (462 aa)
     
  0.979
COG4
Component of oligomeric golgi complex 4 (1094 aa)
     
  0.979
YKT6
R-SNARE protein, YKT6-family (202 aa)
     
  0.972
GOS1
Qb-SNARE protein, Gos1/GS28-family (258 aa)
     
 
  0.963
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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