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EDP00627 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00627" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00627Predicted protein (513 aa)    
Predicted Functional Partners:
EDP00561
Predicted protein (440 aa)
 
 
  0.733
EDO99796
Predicted protein; GTPase that plays an essential role in the late steps of ribosome biogenesis (446 aa)
   
   
  0.711
EDO99769
Predicted protein (396 aa)
   
 
  0.695
EDP00626
Predicted protein (178 aa)
     
        0.692
CPLD16
RNA methyl transferase-related protein (423 aa)
     
        0.688
TRM1
N2,N2-dimethylguanosine tRNA methyltransferase (410 aa)
     
        0.686
EDP00325
Predicted protein (163 aa)
   
      0.678
RCL1
RNA terminal 3’ phosphate cyclase (370 aa)
     
        0.671
EDO99427
Predicted protein (960 aa)
   
   
  0.667
EDO98320
Predicted protein (641 aa)
     
        0.666
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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