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EDP00629 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00629" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00629Predicted protein (214 aa)    
Predicted Functional Partners:
EDO99796
Predicted protein; GTPase that plays an essential role in the late steps of ribosome biogenesis (446 aa)
 
   
  0.601
EDO99394
Predicted protein (268 aa)
   
   
  0.583
LCI8
N-acetylglutamate synthase (611 aa)
              0.557
EDO98053
ERA-like protein, small ras-type GTPase (439 aa)
 
   
  0.520
EDO98824
Predicted protein (207 aa)
     
   
  0.491
EDP06649
Predicted protein (353 aa)
   
 
  0.469
TIG1
Chloroplast trigger factor (548 aa)
   
   
  0.441
EDP08560
Predicted protein (223 aa)
     
 
  0.440
EDP04943
Ribosomal RNA adenine methylase transferase (203 aa)
   
   
  0.426
RNP3
Small nucleolar ribonucleoprotein U3 component (182 aa)
   
   
  0.424
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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