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SECA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SECA1" - Chloroplast-associated SecA protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SECA1Chloroplast-associated SecA protein (1029 aa)    
Predicted Functional Partners:
SECY1
Preprotein translocase secY subunit (451 aa)
   
 
  0.948
SECY2
Preprotein translocase secY subunit (543 aa)
   
 
  0.899
SEC61A
SEC61-alpha subunit of ER-translocon (476 aa)
   
 
  0.841
SECA2
Chloroplast-associated SecA protein (342 aa)
   
 
0.826
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
   
 
  0.808
INFB
Organellar translation initiation factor (373 aa)
   
   
  0.788
FTSY
Chloroplast SRP receptor (338 aa)
     
 
  0.776
LPA1
Membrane GTP-binding protein LepA (579 aa)
     
   
  0.737
RPOD
Chloroplast RNA polymerase sigma factor, c (752 aa)
 
 
  0.727
PCY1
Plastocyanin, chloroplast precursor; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (145 aa)
     
   
  0.726
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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