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EDP00647 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00647" - rRNA methylase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00647rRNA methylase (293 aa)    
Predicted Functional Partners:
PRPL4
Plastid ribosomal protein L4 (243 aa)
     
   
  0.811
HYDEF
Iron hydrogenase assembly protein (1151 aa)
   
   
  0.731
EDP05523
Predicted protein (132 aa)
     
 
  0.727
RPL4
Ribosomal protein L4 (410 aa)
     
   
  0.718
METH1
Cobalamin-dependent methionine synthase (1242 aa)
         
  0.712
METH2
Cobalamin-dependent methionine synthase (1297 aa)
         
  0.712
RPS19
Ribosomal protein S19 (150 aa)
     
   
  0.702
EDO96144
Methylase (339 aa)
   
   
  0.589
AHD1
Bifunctional aspartate kinase/homoserine dehydrogenase (917 aa)
       
  0.515
EDP08299
Predicted protein (165 aa)
   
   
  0.514
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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