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EDP00650 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00650" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00650Predicted protein (949 aa)    
Predicted Functional Partners:
EDP06753
Predicted protein (1521 aa)
     
      0.916
VPS18
Subunit of the VPS-C complex (1029 aa)
     
      0.830
VPS11
Subunit of VPS-C complex (1102 aa)
     
      0.802
VCL1
VPS16-like protein (849 aa)
       
      0.794
VPS41
Vacuolar assembly protein (910 aa)
     
      0.645
VPS39
Subunit of VPS-C complex (812 aa)
     
      0.620
EDP07775
Predicted protein (1113 aa)
     
        0.494
ANK6
Predicted protein (968 aa)
     
        0.469
EDP00912
Predicted protein (1033 aa)
     
        0.463
EDP04479
Predicted protein (823 aa)
     
        0.428
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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