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EDP00651 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00651" - Chalcone-flavanone isomerase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00651Chalcone-flavanone isomerase (258 aa)    
Predicted Functional Partners:
CGL49
ARF/SAR superfamily small monomeric GTP binding protein (186 aa)
           
  0.730
SPO11B
Topoisomerase (1873 aa)
           
  0.710
DCL3
Dicer-like protein (3556 aa)
           
  0.575
RPC19
RNA polymerase subunit (99 aa)
           
  0.493
SPL3
SF3A3 splicing factor 3a, subunit 3 (508 aa)
           
  0.479
EDO97658
Ca2+-ATPase (873 aa)
           
  0.472
CHC1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1738 aa)
           
  0.468
EDP05401
Aldehyde dehydrogenase (536 aa)
           
  0.461
ALD1
Aldehyde dehydrogenase (548 aa)
           
  0.461
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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