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EDP00668 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00668" - RING zinc finger protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00668RING zinc finger protein (967 aa)    
Predicted Functional Partners:
CGLD20
Predicted protein (497 aa)
       
      0.673
EDP06467
Predicted protein (152 aa)
       
 
  0.631
RNB1
3’-5’ exoribonuclease (1061 aa)
     
      0.503
SUFS1
Cysteine desulfurase (430 aa)
     
        0.477
EDP09432
Predicted protein (413 aa)
     
        0.475
EDO98073
Predicted protein (279 aa)
     
   
  0.439
EDP03889
Predicted protein (236 aa)
     
   
  0.438
SEC5
Component of the exocyst complex (1502 aa)
     
      0.437
EDO99453
Predicted protein (240 aa)
     
      0.426
EDP08385
Predicted protein (936 aa)
     
 
  0.417
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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