STRINGSTRING
TRA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"TRA1" - Translin-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRA1Translin-like protein (291 aa)    
Predicted Functional Partners:
EIF3G
Eukaryotic translation initiation factor (280 aa)
           
  0.711
VPS29
Subunit of retromer complex (188 aa)
       
      0.626
PF15
Katanin p80 subunit; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (798 aa)
           
  0.607
AGO1
Argonaute protein (1023 aa)
       
  0.590
AGO2
Argonaute-like protein (1183 aa)
       
  0.590
AGO3
Argonaute-like protein (1037 aa)
       
  0.590
PYR7
CTP synthase (306 aa)
       
      0.461
EDO97684
Predicted protein (285 aa)
     
        0.425
IDA5
Actin (377 aa)
           
  0.418
UBA1
Ubiquitin-activating enzyme E1 (1061 aa)
     
      0.407
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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