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EDP00677 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00677" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00677Predicted protein (532 aa)    
Predicted Functional Partners:
EDP07981
SWI/SNF chromatin remodeling complex protein (642 aa)
     
    0.924
EDO98539
Histone deacetylase (339 aa)
     
  0.892
EDP02188
Histone deacetylase (419 aa)
     
  0.891
EDP01149
Histone deacetylase (418 aa)
     
  0.837
EDO96250
Histone deacetylase (273 aa)
     
  0.832
SWB1
SWIB domain-containing protein 1 (275 aa)
     
    0.806
EDP00245
Histone deacetylase (79 aa)
     
  0.682
EDP05936
chromodomain-helicase-DNA-binding protein (1219 aa)
     
    0.669
VPS52
Subunit of GARP complex (657 aa)
     
        0.659
EDO96788
SIN3 component of histone deacetylase complex (542 aa)
     
  0.658
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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