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EDP00682 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00682" - Transcription initiation factor TFIID, subunit TAF5 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00682Transcription initiation factor TFIID, subunit TAF5 (522 aa)    
Predicted Functional Partners:
EDP06512
TafII-250 protein (625 aa)
     
  0.997
EDP03495
Predicted protein (121 aa)
     
  0.996
EDO99716
Predicted protein (154 aa)
     
  0.995
EDP04069
Predicted protein (74 aa)
     
  0.992
EDO97231
Predicted protein (142 aa)
     
  0.992
EDP09613
Predicted protein (162 aa)
     
  0.987
EDP05450
Global transcription factor (325 aa)
     
  0.986
TF2F
Transcription factor IIF (206 aa)
     
 
  0.985
EDP09083
Predicted protein (758 aa)
     
  0.985
EDP09160
Predicted protein (221 aa)
     
  0.982
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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