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RBM8A protein (Chlamydomonas reinhardtii) - STRING interaction network
"RBM8A" - RNA binding motif protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM8ARNA binding motif protein (144 aa)    
Predicted Functional Partners:
MGO1
Mago nashi-like protein (148 aa)
     
  0.999
PYM1
Exon junction complex protein (190 aa)
     
  0.988
EIF4A3
Eukaryotic initiation factor (392 aa)
     
  0.973
EDP05185
Eukaryotic initiation factor 4A-like protein (413 aa)
     
  0.968
EDP03966
Predicted protein (599 aa)
     
  0.968
EDP03946
Predicted protein (96 aa)
     
  0.968
UPF3
UPF3 protein (371 aa)
       
  0.929
UAP56
Subunit of exon junction complex (435 aa)
     
  0.904
EDP08691
Predicted protein (233 aa)
     
 
  0.890
RSZ22
SR protein factor (200 aa)
   
  0.870
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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