STRINGSTRING
EDP00706 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00706" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00706Predicted protein (216 aa)    
Predicted Functional Partners:
EDP02147
Predicted protein (196 aa)
     
        0.617
EDO98790
Predicted protein (147 aa)
     
        0.510
TRM8
tRNA (guanine-7)-methyltransferase (246 aa)
     
        0.507
EDO95696
Predicted protein (137 aa)
     
        0.503
ADCL1
Aminotransferase (410 aa)
     
        0.502
EDP05654
Predicted protein (344 aa)
     
        0.487
EDP03974
Predicted protein (154 aa)
     
        0.479
EDO99606
Predicted protein (420 aa)
     
        0.477
EDP09968
Predicted protein (221 aa)
     
        0.475
EDP03723
Predicted protein (258 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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