STRINGSTRING
EDP00765 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00765" - Collagen-related protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00765Collagen-related protein (387 aa)    
Predicted Functional Partners:
CDO2
Cysteine dioxygenase (287 aa)
     
        0.651
EDO97250
Predicted protein (136 aa)
     
      0.624
ANK28
Predicted protein (501 aa)
       
  0.574
ANK2
Flagellar associated protein (550 aa)
       
  0.573
ANK26
Predicted protein (210 aa)
       
  0.573
ANK11
Predicted protein (152 aa)
       
  0.573
ANK5
Predicted protein (390 aa)
       
  0.573
ANK23
Predicted protein (648 aa)
       
  0.573
ANK19
Flagellar associated protein (191 aa)
       
  0.573
EDP07376
Predicted protein (81 aa)
       
  0.573
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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